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Knowledge Management and Data Mining in Biomedicine covers the basic foundations of the area while extending the foundational material to include the recent leading-edge research in the field. The newer concepts, techniques, and practices of biomedical knowledge management and data mining are introduced and examined in detail. It is the research and applications in these areas that are raising the technical horizons and expanding the utility of informatics to an increasing number of biomedical professionals and researchers. These concepts and techniques are illustrated with detailed case studies.
List of contents
Foundational Topics in Medical Informatics.- Knowledge Management, Data Mining, and Text Mining in Medical Informatics.- Mapping Medical Informatics Research.- Bioinformatics Challenges and Opportunities.- Managing Information Security and Privacy in Healthcare Data Mining.- Ethical and Social Challenges of Electronic Health Information.- Information and Knowledge Management.- Medical Concept Representation.- Characterizing Biomedical Concept Relationships.- Biomedical Ontologies.- Information Retrieval and Digital Libraries.- Modeling Text Retrieval in Biomedicine.- Public Access to Anatomic Images.- 3D Medical Informatics.- Infectious Diseaxe Informatics and Outbreak detection.- Text Mining and Data Mining.- Semantic Interpretation for the Biomedical Research Literature.- Semantic Text Parsing for Patient Records.- Identification of Biological Relationships from Text Documents.- Creating, Modeling, and Visualizing Metabolic Networks.- Gene Pathway Text Mining and Visualization.- The Genomic Data Mine.- Exploratory Genomic Data Analysis.- Joint Learning Using Multiple Types of Data and Knowledge.
About the author
Hsinchun Chen is McClelland Professor of Management Information Systems (MIS) at the Eller College of the University of Arizona and Andersen Consulting Professor of the Year (1999). He is the author of 15 books and more than 200 articles covering knowledge management, digital library, homeland security, Web computing, and biomedical informatics in leading information technology publications. He serves on ten editorial boards, including: Journal of the American Society for Information Science and Technology, ACM Transactions on Information Systems, IEEE Transactions on Systems, Man, and Cybernetics, IEEE Transactions on Intelligent Transportation Systems, International Journal of Digital Library, and Decision Support Systems. He has served as a Scientific Advisor/Counselor of the National Library of Medicine (USA), Academia Sinica (Taiwan), and National Library of China (China). Dr. Chen founded The University of Arizona Artificial Intelligence Lab in 1990. The group is distinguished for its applied and high-impact AI research. Since 1990, Dr. Chen has received more than $20M in research funding from various government agencies and major corporations. He has been a PI of the NSF Digital Library Initiative Program and the NIH NLM s Biomedical Informatics Program. His group has developed advanced medical digital library and data and text mining techniques for gene pathway and disease informatics analysis and visualization since 1995. Dr. Chen s nanotechnology patent analysis works, funded by NSF, have been published in the Journal of Nanoparticle Research. His research findings were used in the President s Council of Advisors in Science and Technology s report on "The National Nanotechnology Initiative at Five Years: Assessment and Recommendations of the National Nanotechnology Advisory Panel." Dr. Chen s work also has been recognized by major US corporations and been awarded numerous industry awards for his contribution to IT education and research, including: ATT Foundation Award in Science and Engineering and SAP Award in Research/Applications. Dr. Chen has been heavily involved in fostering digital library, medical informatics, knowledge management, and intelligence informatics research and education in the US and internationally. He has been a PI for more than 20 NSF and NIH research grants since 1990. Dr. Chen is conference chair of ACM/IEEE Joint Conference on Digital Libraries (JCDL) 2004 and has served as the conference general chair or international program committee chair for the past six International Conferences of Asian Digital Libraries (ICADL), 1998-2005. He has been instrumental in fostering the ICADL activities in Asia. Dr. Chen is the founder and also conference co-chair of the IEEE International Conference on Intelligence and Security Informatics (ISI), 2003-2006. The ISI conference has become the premiere meeting for international, national, and homeland security IT research. Dr. Chen is an IEEE fellow.
Summary
Knowledge Management and Data Mining in Biomedicine covers the basic foundations of the area while extending the foundational material to include the recent leading-edge research in the field.
