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Informationen zum Autor Martin Crespi is a Research Director at the Institute of Plant Sciences at the Centre National de la Recherche Scientifique, France. Since 2002, Dr. Crespi has been invited to speak at 34 international conferences, 25 seminars at different research institutions in Europe, Canada, USA, and Japan. He has chaired 7 sessions and international scientific congresses and he has participated in 25 book chapters. Klappentext Root Genomics and Soil Interactions explores the use of genome-based technologies to understand root development and adaptability to biotic and abiotic stresses and to changes in the soil environment. Chapters in the first section cover new areas in basic root biology that have been unveiled by genomics research, while chapters in the second section provide the reader with information on genomic approaches being applied to analysis of root responses to the soil environment.Fully integrated, comprehensive in its coverage, and focused on applying the insights from model organisms to agriculturally important crops, Root Genomics and Soil Interactions will be an important resource for root biologists, plant biologists, and crop scientists. Zusammenfassung Fully integrated and comprehensive in its coverage, Root Genomics and Soil Interactions examines the use of genome-based technologies to understand root development and adaptability to biotic and abiotic stresses and changes in the soil environment. Inhaltsverzeichnis Contributors ix Preface xv Chapter 1 Genomics of Root Development 3 Boris Parizot and Tom Beeckman Introduction 3 Genomics of LRI 7 Rise of New Technologies to Understand Lateral Root Development 19 ComparativOmics, the Future 20 Acknowledgments 21 References 21 Chapter 2 The Complex Eukaryotic Transcriptome: Nonprotein-Coding RNAs and Root Development 29 F. Ariel, A.B. Moreno, F. Bardou, and M. Crespi Genomic Approaches Reveal Novel Aspects of the Eukaryotic Transcriptome 29 The Role of RNA-Binding Proteins in npcRNA Metabolism and Activity 34 Nonprotein-Coding RNAs in Root Development 38 Future Perspectives 42 Acknowledgments 42 References 42 Chapter 3 Genomics of Auxin Action in Roots 49 Elisabeth L. Williams and Ive De Smet Introduction 49 The Basis of Auxin Biology 49 Auxin Genomics in Root Development 55 Auxin and Root Hair Development 56 Auxin in Gravitropism 57 Auxin in LR Initiation 57 Conclusion 58 Acknowledgments 58 References 58 Chapter 4 Cell-Type Resolution Analysis of Root Development and Environmental Responses 63 Jose R. Dinneny Introduction 63 Tools for Cell-Type Resolution Analysis 64 Analysis of Spatiotemporal Expression Patterns in the Arabidopsis Root 69 Analysis of Cell-Type-Specific Expression Patterns in the Rice Root 70 Cell-Type-Specific Analysis of Auxin 71 Cell-Type-Specific Analyses of Chromatin 71 Cell-Type-Specific Analyses of Responses to Environmental Change 72 Future Prospects 76 Acknowledgments 76 References 77 Chapter 5 Toward a Virtual Root: Interaction of Genomics and Modeling to Develop Predictive Biology Approaches 79 Julien Lavenus, Leah Band, Alistair Middleton, Michael Wilson, Mikael Lucas, Laurent Laplaze, and Malcolm Bennett Assembling Root Gene Regulatory Pathways Using Genomics 79 Modeling Well-Characterized Small Root Gene Regulatory Networks 81 Building New Large-Scale Root Gene Regulatory Network 84 Multi-Scale Modeling Approaches to Study Root Growth and Development 88 Conclusions and Future Challenges 89 References 91 Chapter 6 Genomics of Root Hairs 93 Hyung-Taeg Cho ...
